| Cover Date | Title and Number | Crossover/Story-arc | Notes |
|---|---|---|---|
| NO MAN'S LAND! | |||
| March 1999 | Batman: No Man's Land #1 | No Law and a New Order!, Part 1 | NML Day 93 |
| March 1999 | Batman: Shadow of the Bat #83 | No Law and a New Order!, Part 2 | NML Day 98 |
| March 1999 | Batman #563 | No Law and a New Order!, Part 3 | NML Day 98-102 |
| March 1999 | Detective Comics #730 | No Law and a New Order!, Part 4 | |
| April 1999 | Batman: Legends of the Dark Knight #116 | Fear of Faith, Part 1 | |
| April 1999 | Batman: Shadow of the Bat #84 | Fear of Faith, Part 2 | |
| April 1999 | Batman #564 | Fear of Faith, Part 3 | |
| April 1999 | Detective Comics #731 | Fear of Faith, Part 4 | |
| May 1999 | Batman: Legends of the Dark Knight #117 | Bread and Circuses, Part 1 | |
| May 1999 | Batman: Shadow of the Bat #85 | Bread and Circuses, Part 2 | NML Day 124 |
| May 1999 | Batman #565 | Mosaic, Part 1 | |
| May 1999 | Detective Comics #732 | Mosaic, Part 2 | |
| June 1999 | Batman: Shadow of the Bat #86 | ||
| June 1999 | Batman #566 | Superman visits Gotham | |
| June 1999 | Detective Comics #733 | ||
| July 1999 | Batman: Legends of the Dark Knight #119 | Claim Jumping, Part 1 | NML Day 127-129 |
| July 1999 | Batman: Shadow of the Bat #87 | Claim Jumping, Part 2 | NML Day 129 |
| July 1999 | Batman #567 | Mark of Cain, Part 1 | NML 129-130 |
| July 1999 | Detective Comics #734 | Mark of Cain, Part 2 | |
| August 1999 | Batman: Legends of the Dark Knight #120 | Pages 1-5 | |
| July 1999 | Nightwing Vol. 2 #33 | ||
| August 1999 | Nightwing Vol. 2 #34 | ||
| August 1999 | Robin Vol. 2 #67 | ||
| August 1999 | Batman: Legends of the Dark Knight #120 | Pages 6-22 | |
| August 1999 | Batman: Shadow of the Bat #88 | Fruit of the Earth, Part 1 | NML 189 |
| August 1999 | Batman #568 | Fruit of the Earth, Part 2 | |
| August 1999 | Detective Comics #735 | Fruit of the Earth, Part 3 | |
| September 1999 | Batman: Legends of the Dark Knight #121 | ||
| September 1999 | Batman: Shadow of the Bat #89 | ||
| September 1999 | Batman #569 | Batgirl III's first solo mission | |
| September 1999 | Robin Vol. 2 #68 | War Beneath the Streets, Part 1 | |
| October 1999 | Robin Vol. 2 #69 | War Beneath the Streets, Part 2 | |
| November 1999 | Robin Vol. 2 #70 | War Beneath the Streets, Part 3 | |
| September 1999 | Detective Comics #736 | ||
| September 1999 | Nightwing Vol. 2 #35 | Escape to Blackgate, Part 1 | |
| October 1999 | Nightwing Secret Files #1 | ||
| October 1999 | Nightwing Vol. 2 #36 | Escape to Blackgate, Part 2 | |
| November 1999 | Nightwing Vol. 2 #37 | Escape to Blackgate, Part 3 | |
| December 1999 | Nightwing Vol. 2 #38 | Pages 1-6, panel 4 | |
| December 1999 | Robin Vol. 2 #71 | ||
| January 2000 | Robin Vol. 2 #72 | Pages 1-20 | |
| December 1999 | Nightwing Vol. 2 #38 | Page 6, panel 4-page 22 | |
| January 2000 | Nightwing Vol. 2 #39 | ||
| January 2000 | Robin Vol. 2 #72 | Pages 21-22 | |
| February 2000 | Robin Vol. 2 #73 | ||
| October 1999 | Batman: Legends of the Dark Knight #122 | Low Road to Golden Mountain, Part 1 | |
| October 1999 | Batman: Shadow of the Bat #90 | Low Road to Golden Mountain, Part 2 | |
| October 1999 | Batman #570 | The Code, Part 1 | |
| October 1999 | Detective Comics #737 | The Code, Part 2 | |
| November 1999 | Batman: Legends of the Dark Knight #123 | Underground Railroad, Part 1 | |
| November 1999 | Batman: Shadow of the Bat #91 | Underground Railroad, Part 1 | |
| November 1999 | Batman #571 | Goin' Downtown, Part 1 | |
| November 1999 | Detective Comics #738 | Goin' Downtown, Part 2 | |
| December 1999 | Batman: Legends of the Dark Knight #124 | ||
| December 1999 | Batman: Shadow of the Bat #92 | ||
| December 1999 | Batman #572 | Jurisprudence, Part 1 | |
| December 1999 | Detective Comics #739 | Jurisprudence, Part 2 | |
| January 2000 | Batman: Legends of the Dark Knight #125 | ||
| January 2000 | Batman: Shadow of the Bat #93 | ||
| January 2000 | Batman #573 | Shellgame, Part 1 | |
| January 2000 | Detective Comics #740 | Shellgame, Part 2 | |
| February 2000 | Batman: Legends of the Dark Knight #126 | Endgame, Part 1 | |
| February 2000 | Batman #574 | Endgame, Part 2 | |
| February 2000 | Detective Comics #741 | Endgame, Part 3 | |
| February 2000 | Batman: Shadow of the Bat #94 | Endgame, Epilogue |
